pandas>=1.3
torch>=1.11
scikit-learn>=1.0
umap-learn>=0.5.3
numpy>=1.2
pytorch-lightning>=1.6
anndata>0.7
matplotlib>=3.5
seaborn>=0.11
torchmetrics>=0.7
ipywidgets>=7.7
protobuf==3.20.0

[dev]
pytest
pytest-cov
black==21.5b0
flake8
mypy
sphinx
sphinx-autodoc-typehints
better-apidoc
six
sphinx_rtd_theme
myst-parser

[test]
pytest
pytest-cov

[vcs]
